View source for 3T3-L1 Adipocyte Fractionation

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==Materials==
*PBS
*Lysis Buffer (25 mM HEPES, 250 mM Sucrose, PI tablet)
*Optiprep
*Cool centrifuges and rotors for JA17/JA25.5, TLA100.3 and NVT90 to 4C

==Fractionation==
#Wash cells twice with ice cold PBS -/-
#Scrape 150 mm dish into 4 mL of Lysis Buffer
#Homogenize in Dounce Homogenizer 20X on ice
#Centrifuge 5 min at 3000g  in JA17 or JA25.5 and collect post-nuclear supernatant (PNS).  If desired resuspend pellet in 2 mL as mitochondria/nuclear fraction (MN)
#Centrifuge supernatant 15 min at 17 200g at 4C in JA17 or JA25.5 with brake off.  Resuspend pellet in 2 mL as plasma membrane (PM).  Save sample.
#Centrifuge supernatant 30 min at 48 000g at 4C in JA17 or JA25.5 with brake off.  Resuspend pellet in 2 mL as high density microsomes (HDM).  Save sample
#Centrifuge supernatant 75 min at 90 000 RPM in TLA 100.3 at 4C.  Pellet is low density microsomes (LDM), supernatant is cytosol save a sample.
#To load equal volumes on a gel, load twice as much volume of PNS and cytosol as MN/PM/HDM/LDM.

==Optiprep Gradient==
#Wash LDM fraction once with lysis buffer and resuspend in 2 mL of lysis buffer.  Save sample as LDM 
#Gently homogenize 10X in  Dounce Homogenizer
#Mix optiprep to generate 18% gradient (1.5 mL optiprep + 3.5 mL LDM)
#Centrifuge 4h at 62 000 RPM in NVT90 at 4C.
#Cut off top of tube and gently remove 350 uL fractions to fresh tubes on ice.
#Store samples at -80.  Make up SDS samples and '''do not boil'''

==References==
PMID 17765682