Difference between revisions of "Designing siRNA for Knockdown"

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(added instructions for reordering a siRNA)
 
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*Click "Order Online" button.
 
*Click "Order Online" button.
 
*Add your name to Reseacher Name and order.
 
*Add your name to Reseacher Name and order.
*Use Promo code '''P756389''' until 30 Sept 2011
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*Use Promo code '''P817600''' until 30 June 2012.
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==Reordering a Stealth siRNA==
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*Go here https://products.invitrogen.com/ivgn/en/US/adirect/invitrogen?cmd=ConfigureRNASingleTube
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*Select 3' Addition to dTdT
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*Select Duplex

Latest revision as of 22:37, 8 February 2012


  • Use Invitrogen's BLOCK-IT RNAi Designer [1]
  • Find the refseq RNA sequence for your gene by going to Entrez Gene and entering the gene name and sequence. The RefSeq sequence should start with "NM_"
  • Select the appropriate control species and whether to target the coding sequence (normally what we do), or the UTRs
  • You will usually get a list of several potential sequences, ordered by location on the RNA molecule. Pick 2-3 sequences, based on the alternative splicing of the RNA. If there is only one listed splice variant on NCBI Gene, pick one towards the N-terminus and one towards the C-terminus.
  • Select continue
  • Click the "tube" button and disregard the scrambled RNA controls.
  • Click "Order Online" button.
  • Add your name to Reseacher Name and order.
  • Use Promo code P817600 until 30 June 2012.

Reordering a Stealth siRNA